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Fitting Generalized Linear Mixed-Effects Models using lme41 days ago
Introduction | Generalized Linear Mixed Models | Adaptive Gauss-Hermite quadrature for GLMMs | Model fitting | Examples | Package versions used | Appendix: derivation of PIRLS
Covariance Structures3 months ago
Introduction | Background | Construction of the Relative Co-factor | Extracting model components | Comparisons with glmmTMB | Reason for Computational Differences | Comparison Setup | Unstructured (General Positive Definite) | Linear Mixed Model | Generalized Linear Mixed Model | Diagonal | Compound Symmetry | Autoregressive Order 1 | References
Autoscaling in lme48 months ago
Autoscale Mechanism | References
Fitting Linear Mixed-Effects Models using lme411 months ago
Introduction | Formula module | Objective function module | Nonlinear optimization module | Output module | Conclusion | Modularization examples
lme4 performance tips4 years ago
overview | setting calc.derivs = FALSE | choice of optimizer | changing optimizer tolerances | parallelization/BLAS | other packages
Computational Methods4 years ago
PLS vs GLS for LMMs14 years ago